Francisco Enguita's profile

Viral cloverleaf-like domain

The enterovirus genus of the Picornaviridae family includes numerous pathogenic viruses responsible for many human diseases, such as the common cold, poliomyelitis, acute flaccid paralysis, and myocarditis. These viruses contain a (+)-sense single-stranded RNA genome with about 7500 nucleotides (nts), which is polyadenylated at the 3′-end and linked covalently with viral protein VPg at the 5′-end. The entire genome consists of a single open reading frame (ORF) flanked by the highly conserved 5′ and 3′ untranslated regions (UTRs). The ~750-nt 5′-UTR harbors modular RNA domains essential for the viral genome translation and replication within the host cells. The extreme 5′-end of the enterovirus RNA genome contains a conserved cloverleaf-like domain that recruits 3CD and PCBP proteins required for initiating genome replication. Here, we report the crystal structure at 1.9 Å resolution of this domain from the CVB3 genome in complex with an antibody chaperone. The RNA folds into an antiparallel H-type four-way junction comprising four subdomains with co-axially stacked sA-sD and sB-sC helices, as you can see from this X-ray structure (PDB code: 8DP3)

#molecularart ... #immolecular ... #virus ... #genome ... #RNA ... #cloverleaf ... #replication ... #xray ... #enterovirus

Structure rendered with @proteinimaging and depicted with @corelphotopaint
Viral cloverleaf-like domain
Published:

Viral cloverleaf-like domain

Published: